Found 11 repositories(showing 11)
SciML
Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.
Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichiometry matrices
trixi-framework
ParaViewCatalyst.jl provides a Julia interface to Catalyst, used for in-situ visualization of simulation data.
Network analysis algorithms for reaction networks modeled using Catalyst.jl
tstrey
No description available
sobakavosne
Analytical engine API utilized Catalyst.jl and Rreaktoro
JuliaBinaryWrappers
No description available
GijsVermarien
An example code of how to use Catalyst.jl for astrophysical thermochemistry.
mschauer
Implement the Mitosis transformation rules backwardfilter and forwardguiding for for SciML's Chemical Reaction Networks
Borealis-BioModeling
Julia-based simulator(s) for PySB models using tools like Catalyst.jl and PyJulia.
mi3nts
A Julia library for parsing reactions from the Master Chemical Mechanism into Catalyst.jl's DSL
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