AI Toolkit for Healthcare Imaging

MONAI Tutorials

Implementations of recent research prototypes/demonstrations using MONAI.

MONAI Label is an intelligent open source image labeling and learning tool.

MONAI Generative Models makes it easy to train, evaluate, and deploy generative models and related applications

MONAI Model Zoo that hosts models in the MONAI Bundle format.

MONAI Versatile Imaging Segmentation and Annotation

No description available

(NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality Microscopy"

A 3D Slicer extension to use AMASSS, ALI-CBCT and ALI-IOS

MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.

Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.

Extension for 3D Slicer for running MONAI Auto3DSeg models

MONAI Deploy aims to become the de-facto standard for developing, packaging, testing, deploying and running medical AI applications in clinical production.

Materials for the 2021 MONAI Bootcamp

Simplifying deep learning for medical imaging

Developing a UNet3D model for accurate MRI skull stripping using the Calgary Campinas 359 dataset, enhancing neuroimaging preprocessing workflows.

Repository to train ControlNet on Brain data (UK BIOBANK) using MONAI Generative Models

No description available

Streamline deep learning experiments using config files

Repository to train Latent Diffusion Models on Chest X-ray data (MIMIC-CXR) using MONAI Generative Models

Material for the 2020 MONAI Bootcamp

Code for the paper published in Deep Generative Models for Health Workshop at the Neurips 2023.

Official implementation for "Generative AI for Medical Imaging: extending the MONAI Framework"

Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)

This repository provides a 3D implementation of DINOv2 for self-supervised pretraining on volumetric (3D) medical images using Lightly, MONAI, and Pytorch Lightning!

cardiAc ultrasound Segmentation & Color-dopplEr dealiasiNg Toolbox (ASCENT)

Brain Segmentation with MONAI and Dynamic Unet (nn-unet)

TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.

MONAI Deploy Informatics Gateway facilitates integration with DICOM compliant systems, enables ingestion of imaging data, helps triggering of workflows with the MONAI Deploy Workflow Manager and offers pushing the output to PACS systems.