Found 10 repositories(showing 10)
invertdna
an R wrapper for ecoPCR, ecoPrimers, etc, by Coissac et al. (see http://metabarcoding.org/obitools/doc/scripts/ecoPrimers.html).
Former version of METAPIPE
Y-Lammers
R script for merging and filtering metabarcode data produced by OBITools
meixilin
Scripts for "Landscape Analyses Using eDNA Metabarcoding and Earth Observation Predict Community Biodiversity in California" by Lin et al. 2021
ldutoit
This script contains the R visualisations presented in the metabarcoding workshop ran by Hugh Cross in Otago October 4, 2018
michaelpierrelee
Scripts for the metabarcoding dataset of Chhetri's paper on water treatment by biofilm reactor
bioinfo-arctic
Set of scripts to manipulate tables generated by Mjolnir, the metabarcoding pipeline, not the mythological hammer.
Kirthanapillay
This is the directory conatains data and scripts associated with the study Dietary Differentiation Between Sympatric Ecotypes of Astatotilapia calliptera From Lake Masoko (Kisiba), Tanzania Revealed by Metabarcoding.
blancobercial
Scripts to analyze environmental eDNA metabarcoding for fish, as well as to create a mothur-like taxonomy file form a GenBank list. Funded by EU Commission BEST 2.0
JustinJonSchaderWilcox
This repository presents the scripts used in the eukaryotic metabarcoding of macaque feces presented in the article, "Unprecedented Symbiont Eukaryote Diversity Is Governed by Internal Trophic Webs in a Wild Non-Human Primate", published in *Protist* in 2018
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