R package for computing multiple hypothesis tests on rows/columns of a matrix or a data.frame

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cmake_minimum_required(VERSION 2.8) project(MpeiAAL) include(ExternalProject) include_directories (../) option (USE_MIRACL "Static-link math functions provided by M.I.R.C.L?" OFF) option (USE_MSIEVE "Static-link msieve library?" OFF) option (KGEN "Generate Karatsuba algorithm files?" OFF) option (GENERATE_BINDINGS "Generate library bindings for Python using SWIG?" ON) set (HEADERS ../AAF/AAL/Algorithms.h ../AAF/AAL/BasicType.h ../AAF/AAL/Converter.h ../AAF/AAL/DecompositionManager.h ../AAF/AAL/EllipticcurvesGF2.h ../AAF/AAL/EllipticcurvesGF3.h ../AAF/AAL/Ellipticcurves.h ../AAF/AAL/FactorizationAlgorithms.h ../AAF/AAL/HashClass.h ../AAF/AAL/Hash.h ../AAF/AAL/IntegerBinomEllipticcurves.h ../AAF/AAL/IntegerBinom.h ../AAF/AAL/Integer.h ../AAF/AAL/KInteger.hpp ../AAF/AAL/Matrix.h ../AAF/AAL/NumberVector.h ../AAF/AAL/PolynomGF2_m_4.h ../AAF/AAL/PolynomGF2_mY_7.h ../AAF/AAL/PolynomGF3.h ../AAF/AAL/PolynomGF3_m_6.h ../AAF/AAL/PolynomGF3_mY_9.h ../AAF/AAL/PolynomGF3n6.h ../AAF/AAL/PolynomGF7.h ../AAF/AAL/PolynomGF7_m_14.h ../AAF/AAL/PolynomGF7_m14.h ../AAF/AAL/PolynomGF7_m_2.h ../AAF/AAL/PolynomGF7_mY_13.h ../AAF/AAL/PolynomGF7_mY_26.h ../AAF/AAL/PolynomGF7_mY_3.h ../AAF/AAL/Polynom.h ../AAF/AAL/PrimeTester.h ../AAF/AAL/ProbingDivisionAlgorithmDecomposition.h ../AAF/AAL/ProbingDivisionAlgorithmDecompositionThread.h ../AAF/AAL/TableManager.h ) set (SOURCES ../AAF/AAL/Converter.cpp ../AAF/AAL/DecompositionManager.cpp ../AAF/AAL/Ellipticcurves.cpp ../AAF/AAL/EllipticcurvesGF2.cpp ../AAF/AAL/EllipticcurvesGF3.cpp ../AAF/AAL/FactorizationAlgorithms.cpp ../AAF/AAL/HashClass.cpp ../AAF/AAL/Hash.cpp ../AAF/AAL/IntegerBinom.cpp ../AAF/AAL/IntegerBinomEllipticcurves.cpp ../AAF/AAL/Integer.cpp ../AAF/AAL/Matrix.cpp ../AAF/AAL/NumberVector.cpp ../AAF/AAL/Polynom.cpp ../AAF/AAL/PolynomGF2_m_4.cpp ../AAF/AAL/PolynomGF2_mY_7.cpp ../AAF/AAL/PolynomGF3.cpp ../AAF/AAL/PolynomGF3_m_6.cpp ../AAF/AAL/PolynomGF3_mY_9.cpp # ../AAF/AAL/PolynomGF3n6.cpp ../AAF/AAL/PolynomGF7.cpp ../AAF/AAL/PolynomGF7_m_14.cpp ../AAF/AAL/PolynomGF7_m14.cpp ../AAF/AAL/PolynomGF7_m_2.cpp ../AAF/AAL/PolynomGF7_mY_13.cpp ../AAF/AAL/PolynomGF7_mY_26.cpp ../AAF/AAL/PolynomGF7_mY_3.cpp ../AAF/AAL/PrimeTester.cpp ../AAF/AAL/ProbingDivisionAlgorithmDecomposition.cpp ../AAF/AAL/ProbingDivisionAlgorithmDecompositionThread.cpp ../AAF/AAL/TableManager.cpp ) set (TESTSRC ../CppUnitLite/Test.cpp ../CppUnitLite/TestRegistry.cpp ../CppUnitLite/TestResult.cpp ../Dev_Project/CodeBlocks\ IDE\ Project/main.cpp # AAL Tests ../AAF/AALT/BasicTypeTests.cpp ../AAF/AALT/DecompositionManagerTests.cpp ../AAF/AALT/EllipticcurvesGF2Tests.cpp ../AAF/AALT/EllipticCurvesGF3Tests.cpp ../AAF/AALT/EllipticCurvesTests.cpp #??? ../AAF/AALT/HashTests.cpp ../AAF/AALT/IntegerBinomEllipticCurvesTests.cpp ../AAF/AALT/IntegerBinomTests.cpp ../AAF/AALT/IntegerTests.cpp ../AAF/AALT/KIntegerTests.cpp ../AAF/AALT/MatrixTests.cpp ../AAF/AALT/NumberVectorTests.cpp ../AAF/AALT/PolynomGF2_m_4Test.cpp # ../AAF/AALT/PolynomGF3n6Tests.cpp ../AAF/AALT/PolynomGF3Tests.cpp ../AAF/AALT/PolynomGF7Test.cpp ../AAF/AALT/PolynomTests.cpp ../AAF/AALT/TestFoctarizationAlgorithms.cpp ../AAF/AALT/TestPolynomGF2_mY_7.cpp ../AAF/AALT/TestPolynomGF3_m_6.cpp ../AAF/AALT/TestPolynomGF3_mY_10.cpp ../AAF/AALT/TestPolynomGF7_m_14.cpp ../AAF/AALT/TestPolynomGF7_m14.cpp ../AAF/AALT/TestPolynomGF7_m_2.cpp ../AAF/AALT/TestPolynomGF7_mY_13.cpp ../AAF/AALT/TestPolynomGF7_mY_3.cpp ../AAF/AALT/TestPrimeTester.cpp ) source_group ("Header Files" FILES ${HEADERS}) source_group ("Source Files" FILES ${SOURCES}) source_group ("CppUnitLite" FILES ${TESTSRC}) message("-- Files: ${SOURCES}") enable_testing() configure_file(config.h.in ${CMAKE_CURRENT_SOURCE_DIR}/config.h) add_library (AAL ${SOURCES}) add_executable (aaltest.exe ${TESTSRC}) target_link_libraries(aaltest.exe AAL) #add_test (TestsRun aaltest.exe) add_test (TestsPass aaltest.exe) set_tests_properties (TestsPass PROPERTIES PASS_REGULAR_EXPRESSION "There were no test failures") install (FILES ${HEADERS} DESTINATION include) install (TARGETS AAL DESTINATION lib) if (USE_MIRACL) ExternalProject_Add(miracl PREFIX . # URL http://www.certivox.com/wp-content/themes/certivox/res/miracl.zip # URL http://www.shamus.ie/uploads/File/miracl3.zip # GIT_REPOSITORY git://github.com/CertiVox/MIRACL.git GIT_REPOSITORY git://github.com/radixvinni/MIRACL.git #UPDATE_COMMAND "" # PATCH_COMMAND patch -t -N -p0 < ../../miracl.patch # CONFIGURE_COMMAND cmake . # BUILD_COMMAND make -C .. INSTALL_COMMAND "" ) add_library(imp_miracl dlopen.cpp) #note: linux only by now target_link_libraries(imp_miracl dl) add_dependencies(imp_miracl miracl) target_link_libraries(AAL imp_miracl) endif (USE_MIRACL) if (USE_MSIEVE) ExternalProject_Add(msieve PREFIX . # SVN_REPOSITORY https://msieve.svn.sourceforge.net/svnroot/msieve/trunk SVN_REPOSITORY https://svn.code.sf.net/p/msieve/code/trunk CONFIGURE_COMMAND "" # PATCH_COMMAND patch -t -N -p0 < ../../msieve.patch BUILD_COMMAND make -C ../msieve all INSTALL_COMMAND "" ) add_library(imp_msieve STATIC IMPORTED) set_property(TARGET imp_msieve PROPERTY IMPORTED_LOCATION src/msieve/libmsieve.a) add_dependencies(imp_msieve msieve) include_directories (src/msieve/include) add_library (demo src/demo.c) find_package (Threads) target_link_libraries (demo imp_msieve ${CMAKE_THREAD_LIBS_INIT} gmp m z dl) target_link_libraries(AAL demo) endif (USE_MSIEVE) if (KGEN) ADD_EXECUTABLE(kgen.exe kgen.cpp) GET_TARGET_PROPERTY(K_GENERATOR_EXE kgen.exe LOCATION) # add the custom command that will generate karatsuba files ADD_CUSTOM_COMMAND( OUTPUT ../AAF/AAL/karatsuba64.hpp COMMAND ${K_GENERATOR_EXE} 64 > ../AAF/AAL/karatsuba64.hpp DEPENDS kgen.exe #MAIN_DEPENDENCY ) # now create an executable using the generated files add_custom_target(kgen DEPENDS ../AAF/AAL/karatsuba64.hpp) add_dependencies(AAL kgen) add_dependencies(kgen kgen.exe) endif (KGEN) if (GENERATE_BINDINGS) FIND_PACKAGE(SWIG REQUIRED) INCLUDE(${SWIG_USE_FILE}) FIND_PACKAGE(PythonLibs) INCLUDE_DIRECTORIES(${PYTHON_INCLUDE_PATH}) INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}) SET(CMAKE_SWIG_FLAGS "") SET_SOURCE_FILES_PROPERTIES(AAL.i PROPERTIES CPLUSPLUS ON) SWIG_ADD_MODULE(AAL python AAL.i) SWIG_LINK_LIBRARIES(AAL ${PYTHON_LIBRARIES} AAL) endif (GENERATE_BINDINGS) if (MSVC) add_definitions (/W0) elseif (CMAKE_COMPILER_IS_GNUCXX) add_definitions (-w -fPIC) endif (MSVC) ADD_CUSTOM_TARGET(ChangeLog COMMAND svn update COMMAND svn log > ChangeLog )

A conda-smithy repository for r-matrixtests.

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:exclamation: This is a read-only mirror of the CRAN R package repository. matrixTests — Fast Statistical Hypothesis Tests on Rows and Columns of Matrices. Homepage: https://github.com/karoliskoncevicius/matrixTests Report bugs for this package: https://github.com/karoliskoncevicius/matrixTests/issues

MatrixTest and git test

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matrixtest is a Go testing package with matrixed testcases

Matrix Class that uses a doubly linked list class with a test file called MatrixTest.java

MatrixTest is a tool for matrix test where you have to run a cluster of similar shell commands.