R toolkit for the analysis of single-cell chromatin data

Manage large and heterogeneous data spaces on the file system.

Boost learning for GNNs from the graph structure under challenging heterophily settings. (NeurIPS'20)

Workflow management for signac-managed data spaces.

An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)

Signac

An analytics package for single cell data

Rapidly visualize signac projects through a customizable dashboard interface.

Examples for the signac framework.

Analysis of scATAC-seq data using Signac, Seurat, Cicero and Monocle3

Documentation for the signac framework.

Tutorials for computational methods (Signac, Cicero, SCENT, ArchR) linking peaks to genes using single-cell RNA + ATAC multiome data.

Code to reproduce analyses shown in the Signac paper

A package used to convert Seurat, Giotto, Signac, ArchR analysis object into AnnData format

API para aplicação de libras Signacle

Reproducible exploration of organic photovoltaic morphology self-assembly using molecular dynamics.

full-stack blueprint for transforming your thoughts into real software systems using the SignaCode method. It builds on the foundation of Ξ Law, The Brown Equation — a generative framework for symbolic programming — and breaks down the pipeline so you can start building with no traditional programming background.

!!! OUTDATED!!!

Integration of the `fbpic` PIC code with the `signac` framework.

No description available

No description available

Single Command Docker container to convert ATAC-seq peaks to gene activity scores

No description available

No description available

ThunderBio scRNA-seq pipeline

A conda-smithy repository for signac.

A conda-smithy repository for signac-dashboard.

metamds is currently read-only; see signac.io for a recommended data and workflow manager

Slides and notebooks demonstrating signac for PyData Ann Arbor Meetup 2018

This is a fork of https://github.com/glotzerlab/signac