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TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FASTQ files to obtain raw interaction binned matrices (Hi-C like matrices), normalize and correct interaction matrices, identify and compare the so-called Topologically Associating Domains (TADs), build 3D models from the interaction matrices, and finally, extract structural properties from the models. TADbit is complemented by TADkit for visualizing 3D models
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Update nomalize_oneD to prevent invalid parsing of quotes
2838129View on GitHubMerge pull request #376 from david-castillo/hotfix/imp_deprec
e2d43f3View on GitHubMerge pull request #34 from david-castillo/tune_restraints
1c5a1a6View on GitHubMerge pull request #33 from david-castillo/tune_restraints
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