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3Dmol.js

3dmol•PUBLIC

WebGL accelerated JavaScript molecular graphics library

computational-biologycomputational-chemistrymolecular-graphicsmolecular-modeling

Other

Created on Oct 2, 2014

Updated on Apr 7, 2026

Stars

965

Forks

219

Watchers

965

Open Issues

44

Repository Health Score

💛

73/100

Good

Overall repository health assessment

Score Breakdown

Activity

Active development - updated this week

30/30

100%

Community

965 stars, 219 forks

3/30

10%

Documentation

Has description, wiki, license

20/20

100%

Maintenance

4.6% issue ratio

20/20

100%

Health score is calculated based on activity, community engagement, documentation quality, and maintenance practices

Languages

Jupyter Notebook

78.1%

HTML

12.8%

JavaScript

8.1%

TypeScript

0.7%

CSS

0.1%

GLSL

0.0%

Python

0.0%

TeX

0.0%

BibTeX Style

0.0%

Issues Analytics

66

Total Issues

All time

7

Open

11% of total

59

Closed

Dependencies37 total

4

Production

33

Development

Production Dependencies (4)

iobuffer^5.0.0

netcdfjs^3.0.0

pako^2.1.0

upng-js^2.1.0

Development Dependencies (33)

@babel/core^7.20.7

@babel/eslint-parser^7.19.1

@babel/plugin-transform-typescript^7.20.7

@types/pako^2.0.0

better-docsgithub:3dmol/better-docs#master

canvas^2.11.0

clean-jsdoc-themegithub:3dmol/clean-jsdoc-theme#master

codecov^3.8.3

del^7.0.0

eslint^9.0.0

eslint-webpack-plugin^5.0.0

glcheckgithub:3dmol/glcheck

jest^29.0.0

jest-environment-jsdom^29.3.1

jest-fixed-jsdom^0.0.9

jest-webgl-canvas-mock^0.2

jquery^3.6.3

jsdoc^4.0.0

jsdom^20.0.3

jsdom-worker^0.3.0

node-fetch^2.7.0

raw-loader^4.0.2

source-map-support^0.5.21

taffydb^2.7.3

terser-webpack-plugin^5.3.6

ts-loader^9.4.2

ts-node^10.9.1

tsc^2.0.4

typescript^5.6.3

url-loader^4.1.1

webpack^5.75.0

webpack-bundle-analyzer^4.7.0

webpack-cli^5.0.1

3dmolv2.5.4

89% of total

2mo

Avg Close Time

Avg response

Issues Activity: Last 6 months

Top Labels

Hottest Issues

1

#795 [BUG] - When trying to display multiple viewers, an error occurs specifically when trying to display over 16 structures in Chrome, Brave, JupyterLab App

37

closed

2

#812 Issue with v2.3.0 and above

14

closed

3

#810 Consider modified amino acid residues as protein atoms (hetflag: false)

enhancement

13

closed

4

#784 use less CPU for animations

enhancement

13

closed

5

#770 [BUG] Crystal supercell displays in a very weird way

bug

10

closed

Top Contributors

1

dkoes

User

1.5k

commits

2

helblazer811

User

113

commits

3

jaxmatrix

User

104

commits

4

mattragoza

User

102

commits

5

nrego

User

99

commits

6

RyanGuild

User

93

commits

7

Manohar-94

User

90

commits

8

jlc206

User

58

commits

9

sky1e

User

47

commits

10

jakubication

User

40

commits

Recent Commits

Merge pull request #852 from dxdc/aromatic-bonds-feature

David Koes•1 month ago

392faa7View on GitHub

fix: prevent crash when frames lack 3DMOL_STYLE blocks

Daniel Caspi•1 month ago

98c3b74View on GitHub

feat: add aromaticStyle option with torus rendering for aromatic rings

Daniel Caspi•1 month ago

2d0796fView on GitHub

test: add tests for ring dashed bonds, SDF style parsing, and V3000

Daniel Caspi•1 month ago

fe6c8d2View on GitHub

feat: per-bond style overrides and DRY draw helpers

Daniel Caspi•1 month ago

ab2b879View on GitHub

feat: ring-aware dashed bond placement

Daniel Caspi•1 month ago

148e424View on GitHub

fix: align frame indices with modelDatas and apply embedded styles

Daniel Caspi•1 month ago

2586225View on GitHub

feat: add 3DMOL_STYLE SDF property parsing and parser modernization

Daniel Caspi•1 month ago

309d3dbView on GitHub

Merge pull request #850 from utkarshasinha/fix-hidden-hover-callback

David Koes•1 month ago

8bb2f59View on GitHub

fix: skip hover callbacks for hidden objects

utkarshasinha•1 month ago

a99358bView on GitHub

Merge pull request #848 from dxdc/patch-4

David Koes•2 months ago

b9f8c3fView on GitHub

Refactor bond drawing colors for consistency

Daniel Caspi•2 months ago

229914bView on GitHub

Merge pull request #847 from dxdc/dashed-bonds-fix-2

David Koes•2 months ago

0ca1bd2View on GitHub

fix: stabilize dashed bond side selection across conformations

Daniel Caspi•2 months ago

2242f1bView on GitHub

Merge pull request #846 from dxdc/dashed-bonds-fix

David Koes•2 months ago

04a0849View on GitHub

View all commits