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This repo documents my practice in single-cell RNA-seq analysis, using 10X Genomics data to perform quality control, normalisation, dimensionality reduction (PCA/UMAP), and automated cell type assignment with cellassign. It is based on tutorials but adapted for clarity and deeper learning.
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16
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Rename scRNA_04_CellAssign_Liver.Rmd to scRNA_03_CellAssign_Liver.Rmd
e981daaView on GitHubRename QC_EDA_Visualisation.Rmd to scRNAseq02_QC_EDA_Visualisation.Rmd
efe4994View on GitHubRename QC_EDA_Visualisation.rmd to QC_EDA_Visualisation.Rmd
3d42109View on GitHub