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RhettRautsaw/VariantCaller - GitHub Explorer | GitHub Explorer | Trending | Compare

VariantCaller

RhettRautsaw•PUBLIC

VariantCaller is a wrapper for the 2022 gatk & bcftools best practices + phasing with WhatsHap.

bcftoolsgatkgatk-bestpracticesindelsphasingsamtools

GNU General Public License v3.0

Created on Apr 22, 2022

Updated on Jun 23, 2025

Stars

3

Forks

0

Watchers

3

Open Issues

0

Repository Health Score

❤️

40/100

Poor

Overall repository health assessment

Score Breakdown

Activity

Inactive - no updates in 3+ months

0/30

0%

snps

variant-calling

Community

3 stars, 0 forks

0/30

0%

Documentation

Has description, wiki, license

20/20

100%

Maintenance

0.0% issue ratio

20/20

100%

Health score is calculated based on activity, community engagement, documentation quality, and maintenance practices

Languages

Python

100.0%

Issues Analytics

1

Total Issues

All time

0

Open

0% of total

1

Closed

100% of total

7h

Avg Close Time

Fast response ✅

Issues Activity: Last 6 months

Hottest Issues

1

#1 variantCaller not found in conda repos

3

closed

Dependencies

No package.json found

This might not be a Node.js project

Top Contributors

No contributors data available

Recent Commits

fixed some things, but I don't remember what I fixed

Rhett Rautsaw•3 years ago

5b240a5View on GitHub

Initialization

Rhett Rautsaw•3 years ago

3bdfdf6View on GitHub

View all commits