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Sanofi-Public/CodonBERT - GitHub Explorer | GitHub Explorer | Trending | Compare

CodonBERT

Sanofi-Public•PUBLIC

Repository for mRNA Paper and CodonBERT publication.

Other

Created on Nov 7, 2023

Updated on Apr 4, 2026

Stars

143

Forks

23

Watchers

143

Open Issues

7

Repository Health Score

💛

70/100

Good

Overall repository health assessment

Score Breakdown

Activity

Active development - updated this week

30/30

100%

Community

143 stars, 23 forks

0/30

0%

Documentation

Has description, wiki, license

20/20

100%

Maintenance

4.9% issue ratio

20/20

100%

Health score is calculated based on activity, community engagement, documentation quality, and maintenance practices

Languages

Python

72.6%

Jupyter Notebook

27.4%

Issues Analytics

10

Total Issues

All time

7

Open

70% of total

3

Closed

30% of total

3w

Avg Close Time

Avg response

Issues Activity: Last 6 months

Hottest Issues

1

#6 Inquiry Regarding Vocabulary Size in CodonBERT PyTorch Model

6

3

open

2

#2 Guidance on how to use the model

0

6

open

3

#3 Questions about inconsistencies between the paper and the released data

3

open

4

#11 Assertion `srcIndex < srcSelectDimSize` failed. when finetune.py

2

closed

5

#1 Missing files

2

closed

Dependencies

No package.json found

This might not be a Node.js project

Top Contributors

1

JasmineSizhen

User

5

commits

2

lanele73

User

3

commits

Recent Commits

Merge pull request #4 from JasmineSizhen/master

Lorenzo Kogler Anele•1 year ago

9c31eccView on GitHub

Update README.md

Sizhen Li•1 year ago

0f15df4View on GitHub

Update README.md

Sizhen Li•1 year ago

dbb7199View on GitHub

Update README.md

Sizhen Li•1 year ago

808f4e7View on GitHub

Update README.md

Sizhen Li•1 year ago

fe5396bView on GitHub

re-org

JasmineSizhen•1 year ago

79c2cf8View on GitHub

Update README.md

Sizhen Li•1 year ago

1ad4d4eView on GitHub

mrna stability dataset

Lorenzo Kogler Anele•1 year ago

587dfa4View on GitHub

update files

Lorenzo Kogler Anele•1 year ago

7a204ffView on GitHub

Update README.md

Lorenzo Kogler Anele•1 year ago

7ade2c2View on GitHub

train_seqs_id_2

Lorenzo Kogler Anele•1 year ago

a50615aView on GitHub

train_seqs_id_1

Lorenzo Kogler Anele•1 year ago

d316d67View on GitHub

train_samples.csv

Lorenzo Kogler Anele•1 year ago

857a3b5View on GitHub

train and finestune scripts

Lorenzo Kogler Anele•1 year ago

879ebdaView on GitHub

update dependencies

I0548864•1 year ago

e23f794View on GitHub

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