Some useful shared tool for using luigi on the cluster and some tasks performing common bioinformatics stuff
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Have HISAT task sort bam output and optionally and read group tags
34a0520View on GitHubChange HISAT outputs to be generic bam/log from hisat_bam/hisat_log
083f7bbView on GitHubRemove comments from GFF output as this breaks some downstream tools
97c1629View on GitHubCreate SlurmMPITask to handle srun/mpiexec incompatibility
0c7c022View on GitHubAdd task to add Portcullis junction annotations to JBrowse
17090e5View on GitHub