Update README with crypt.h installation note

lfs?

Update README

Add GO to Pfam file for automatic length determination

Modify configs to not run analysis in full pipeline by default

Skip analysis for the default demo

Fix weights_only=False for torch 2.6

Environment and installation

Merge pull request #4 from dtischer/fix_H_for_helices

fix: H for helices

README updates

Reorganize file directories

Update README and MIT license

Intial commit