An interactive R Shiny application for RNA-seq data analysis built with Spark backend support. It offers high-performance DEG analysis, real-time visualization (volcano plots, heatmaps), PCA, and functional enrichment (GO, KEGG, GSEA) in a modular, reactive framework.
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Merge pull request #43 from atgenomix/feat/support_mouse_db
e7175d2View on GitHubfix(gseaFCModuleServer): invert geneList sorting for GSEA analysis
b01877fView on GitHubfeat(gseaFCModuleServer): add noise to geneList and sort it for GSEA analysis
adcd854View on GitHubfix(gseaFCModuleServer): update local_pvalCutoff to 1 and add noise to geneList for GSEA
421f390View on GitHubfix(syntax): fix syntax error with comma inside kegg_enrich_dotplot
436cfefView on GitHubfeat(cutoff): remove cutoff limitation to display as much potential candidates as possible
6434b1bView on GitHubfix(syntax): remove unnecessary comma in gseaFCModuleServer
21cd34fView on GitHubfix(syntax): remove unnecessary comma in gseaFCModuleServer
47e4f42View on GitHubMerge pull request #41 from atgenomix/feat/support_mouse_db
7813616View on GitHubfeat(mouse): support enrichment analysis with mouse database
1e6be48View on GitHub