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Mandrake 🌿/👨🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding
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Merge branch 'master' of https://github.com/bacpop/mandrake into add-gpu-archs
8912962View on GitHubUpdate CMake and Makefile for enhanced Python and CUDA support
50143dcView on GitHubClean up Python bindings and improve code formatting in wtsne.hpp
fce872bView on GitHubRefactor pairsnp function to improve performance by replacing atomic variables with simpler types and optimizing OpenMP scheduling
0243945View on GitHubUpdate CMake configuration for CUDA support and simplify pybind11 integration
6b70726View on GitHubMerge branch 'master' of https://github.com/bacpop/mandrake into test-pipelines
bc215c2View on GitHubUpdate GitHub Actions workflow to support multiple OS versions in the Python build matrix
8da8c4dView on GitHubUpdate Python version matrix in GitHub Actions workflow to include Python 3.9
8a54a65View on GitHubRefactor conditional_probabilities function to simplify loop indexing and remove debug output for P values
1eaa0deView on GitHubRefactor conditional_probabilities function to use max limits for beta values and optimize loop indexing; add debug output for P values
6bbe18fView on GitHub321
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