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python_for_microscopists

bnsreenu•PUBLIC

https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1

MIT License

Created on Jun 10, 2019

Updated on Apr 9, 2026

Stars

4.4k

Forks

2.5k

Watchers

4.4k

Open Issues

80

Repository Health Score

💛

89/100

Good

Overall repository health assessment

Score Breakdown

Activity

Active development - updated this week

30/30

100%

Community

4,378 stars, 2,495 forks

19/30

63%

Documentation

Has description, wiki, license

20/20

100%

Maintenance

1.8% issue ratio

20/20

100%

Health score is calculated based on activity, community engagement, documentation quality, and maintenance practices

Languages

Jupyter Notebook

98.6%

Python

1.4%

HTML

0.0%

Dockerfile

0.0%

Procfile

0.0%

Issues Analytics

76

Total Issues

All time

63

Open

83% of total

13

Closed

17% of total

5mo

Avg Close Time

Avg response

Issues Activity: Last 6 months

Hottest Issues

1

#81 In 331_fine_tune_SAM_mito.ipynb, the class SAMDataset(Dataset) needs to be adjusted to have 3 bands to go into the processor

5

4

open

2

#75 Licening / copyright

3

1

closed

3

#32 Error of VAE sample code:

3

open

4

#17 How to download the Electron Microscopy Dataset dataset to run the "227_mito_segm_using_models_from_Keras_Unet_collection.py"?"

2

1

open

5

#82 Overlapping instances in fine-tuning SAM

2

open

Dependencies

No package.json found

This might not be a Node.js project

Top Contributors

1

bnsreenu

User

400

commits

Recent Commits

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