Snakemake pipeline to evaluate polymerase-amplified HiFi read sets
Stars
3
Forks
0
Watchers
3
Open Issues
0
Overall repository health assessment
No package.json found
This might not be a Node.js project
51
commits
added human variant calling benchmark mode to polymeval script
b53c854View on GitHubadded human profile to gitignore, at it will be changed based on user input
d5d0929View on GitHubadded relevant rules, environments and profiles for HG002 variant call benchmarking
4fba7b7View on GitHubadd rasusa seed setting, pairwise combination mode, rerun triggers mtime from snakemake and haploid genome size option for hifiasm
86c6094View on GitHuballow up to 10 pairwise combos in get_downsample_rates.py
242f5ffView on GitHubslightly changed the parameters for detecting assembly gaps
d0b1301View on GitHubremoved filter that only displays the top 10 assemblies in combine mode
90c0022View on GitHub