fix: nested repo detection, overwrite on update, gitignore automation (v2.0.2)

fix: install.sh copies MCP servers into workspace instead of referencing source repo

config: bump version to 2.0.1 across README, search server, and package.json

docs: add v2.0.1 changelog entry for library fix and install script

fix: library server crash on fresh databases — duplicate citations column

feat: add install script for workspace setup

feat: v2.0.0 — 10 databases, search wizard, OA prioritisation, 5-tool surface

feat: database schema versioning with migrations table

feat: multi-style citation support (APA7, Harvard, Chicago, Vancouver, IEEE, MLA)

feat: add brand image, update README, fix portability

feat: initial PRIMA Scholar plugin — academic search, document library, citation writing