Added the usual MIT license.

Updated code to use the latest versions of the C++ libraries. (#2)

Switch to the byteme library for loading features.

Capped max.depth to avoid duplicate problems, also scran.chan consistency.

Updated the invocation on the README.

Parse gene annotations to identify mitochondrial transcripts for QC. (#1)

Align defaults with those used by kana.

Corrected the selection of the top HVGs.

Updated the ignore file.

Fleshed out the README for interested users.

Save some results to an output directory.

Report timings as the analysis runs.

Switch from OpenMP to threads for more control, Mac functionality.

Concurrent execution of t-SNE, clustering and UMAP.

Initial commit.