PAT001 example report

PAT002 report example

fix genomic-results: PAT002 dry_run payloads + missing-file fallback

updated for PAT002

update servers for PAT002 testing

updates for PAT002 testing

fix remaining E2E regressions: DRY_RUN in tool handlers, Pydantic field_validator, path resolver

fix PAT002 end to end

fix E2E regression: DRY_RUN guards, JSON string parsing, completeness checks, new spatial tools

update for PAT002

fix PAT002

fix HRD recommendation text and specify multiomics paths in PAT002 prompts

updated PAT002

add PAT002 data gaps and missing test prompts

prepare platform for PAT002 breast cancer test run