Remove hardcoded paths for public release

Update ISSUES.md - Production verified working

Document production deployment issues and fixes

Fix MCP server initialization issues

Add comprehensive MCP server test suite - Phase 3 Part 3

Fix MCP server connection issues - Phase 3 Part 2 complete

Implement FastMCP server for Obsidian AI search (Phase 3 Part 1)

Complete Phase 2 Part 3: Performance Testing & Validation

Implement Phase 1 Part 1: Core Components Setup