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Python library to handle Gene Ontology (GO) terms
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1.3k
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174
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15
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Add self-documenting column header to grouped_gos and sections output files (#330)
bc1f4baView on GitHubSupport optional relationships (e.g. `part_of`) in `paths_to_top` (#332)
801a7f2View on GitHubAdd GO ID validity checks and standalone checker for id2gos annotation format (#331)
0cd9effView on GitHubAdd `get_deepest_common_ancestors()` and `shortest_path()` to `goatools.semantic` (#328)
acc5e18View on GitHubAdd `--no_ldr` flag to suppress L/D/R annotations in GO term plot boxes (#327)
0cae2e6View on GitHubAdd `fold_enrichment` property to `GOEnrichmentRecord` (#326)
dae7243View on GitHubFix GoSearch to search only GO term names by default (match geneontology.org behaviour) (#325)
52bc17eView on GitHubAdd notebook and tests for IC calculation with custom id2go annotations (#324)
0c01528View on GitHubAdd `--go_terms` flag to restrict enrichment analysis to specific GO terms (#323)
ad79c4bView on GitHubFix stray "label" node in DAG plots when no title is provided (#321)
b2bb5c1View on GitHubAdded --wrap-width to CLI of plot_go_term.py to wrap long GO terms in (#319)
7817b80View on GitHub