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Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark/bwa-meth + MethylDackel or bwa-mem + rastair
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715
commits
547
commits
189
commits
114
commits
57
commits
49
commits
46
commits
43
commits
26
commits
19
commits
fix: Added support for the `bwamem` aligner in the AWS full test workflow configuration, ensuring compatibility with both CPU and ARM compute environments.
f3d89d2View on GitHubchore: update changelog for correct bam file publishing in alignments folder for --skip_deduplication and --rrbs options
10e48fdView on GitHubchore: update test snapshots after skip_dedup/rrbs publishing fix
c2caad7View on GitHubfix: add BWA_INDEX and SAMTOOLS_IDXSTATS processes, update publishDir settings
6fdd85aView on GitHubfix: update version tracking and output for nf-core methylseq workflow
1957d21View on GitHub